PHATRDRAFT_49112 homogentisate-dioxygenase (PLN02658)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49112	chr_20	homogentisate-dioxygenase (PLN02658)	620961	622445	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0044

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0026	0.46	480 11000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PLN02658		homogentisate 1,2-dioxygenase	cl17306	741.139	0	20 - 481	specific	215355
HgmA superfamily		homogentisate 1,2-dioxygenase; Homogentisate dioxygenase cleaves the aromatic ring during the...	-	741.139	0	20 - 481	superfamily	266617

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
34900		Not available	Not available	Not available	457592	Cre02.g091200.t1.1	AT5G54080.2	350698

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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