PHATRDRAFT_49293 nad-dependent dna ligase (dnlj)
Phaeodactylum tricornutum

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_49293 chr_21 nad-dependent dna ligase (dnlj) 489500 492159 +
NCBI ID Ensembl Genomes exon ID
Not available Not available
Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0170
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
BRCT Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within... cl00038 37.6863 0.00184293 802 - 859 specific 237994
BRCT superfamily Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within... - 37.6863 0.00184293 802 - 859 superfamily 260149
LIGANc superfamily NAD+ dependent DNA ligase adenylation domain. DNA ligases catalyze the crucial step of joining the... - 195.887 3.75E-56 104 - 463 superfamily 261674
DNA_ligase_OB superfamily NAD-dependent DNA ligase OB-fold domain; DNA ligases catalyse the crucial step of joining the... - 101.523 2.05E-25 466 - 540 superfamily 145978
HHH_5 Helix-hairpin-helix domain; Helix-hairpin-helix domain. cl14815 44.4948 8.33E-06 608 - 667 specific 258660
H3TH_StructSpec-5'-nucleases superfamily H3TH domains of structure-specific 5' nucleases (or flap endonuclease-1-like) involved in... - 44.4948 8.33E-06 608 - 667 superfamily 265460
dnlj DNA ligase, NAD-dependent; All proteins in this family with known functions are NAD-dependent DNA... - 442.877 9.08E-144 168 - 859 multi-dom 233030
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
264833 Not available 146463 219398 Not available Cre06.g294200.t1.1 Not available Not available
KEGG description KEGG Pathway
Not available Not available
Not available -
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