PHATRDRAFT_49352 (ATG_C superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49352	chr_22	(ATG_C superfamily)	4446	10556	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0041

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0033	0.42	18000 540000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ATG_C superfamily		ATG C terminal domain; ATG2 (also known as Apg2) is a peripheral membrane protein. It functions in...	-	81.8674	7.87E-18	1830 - 1925	superfamily	192254

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
4726		Not available	Not available	312384	Not available	Cre09.g408950.t1.1	AT3G19190.1	528832

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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