PHATRDRAFT_49405 peroxisomal biogenesis factor 12 (Pex2_Pex12 superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49405	chr_22	peroxisomal biogenesis factor 12 (Pex2_Pex12 superfamily)	170860	172107	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0066

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0048	0.40	610 98000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Pex2_Pex12 superfamily		Pex2 / Pex12 amino terminal region; This region is found at the N terminal of a number of known and...	-	63.5473	5.08E-12	109 - 259	superfamily	252782
zf-C3HC4_2		Zinc finger, C3HC4 type (RING finger); Zinc finger, C3HC4 type (RING finger).	cl17238	43.9857	3.09E-06	361 - 396	specific	258185
RING superfamily		RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60...	-	43.9857	3.09E-06	361 - 396	superfamily	266579

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	283137	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments