PHATRDRAFT_49439 cbf1 interacting corepressor cir (Cir_N)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49439	chr_22	cbf1 interacting corepressor cir (Cir_N)	250625	251725	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0303

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0063	0.36	810 2000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Cir_N		N-terminal domain of CBF1 interacting co-repressor CIR; This is a 45 residue conserved region at...	cl10889	47.1503	2.32E-07	12 - 48	specific	198151
Cir_N superfamily		N-terminal domain of CBF1 interacting co-repressor CIR; This is a 45 residue conserved region at...	-	47.1503	2.32E-07	12 - 48	superfamily	264115

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
934		Not available	234845	322386	208623	Not available	Not available	482173

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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