PHATRDRAFT_49469 splicing factorsubunitisoform 2 (DUF382)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_49469 chr_22 splicing factorsubunitisoform 2 (DUF382) 328262 329830 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0037

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF382 superfamily Domain of unknown function (DUF382); This domain is specific to the human splicing factor 3b... - 227.119 7.28E-72 132 - 261 superfamily 112836
DUF382 superfamily Domain of unknown function (DUF382); This domain is specific to the human splicing factor 3b... - 227.119 7.28E-72 132 - 261 superfamily 112836
PSP PSP; Proline rich domain found in numerous spliceosome associated proteins. cl02643 81.8131 3.14E-19 271 - 317 specific 202864
PSP superfamily PSP; Proline rich domain found in numerous spliceosome associated proteins. - 81.8131 3.14E-19 271 - 317 superfamily 207686

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
269780 Not available 158351 254661 216021 Cre12.g514450.t1.2 AT4G21660.1 297360

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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