PHATRDRAFT_49563 mgc173657 protein (GH20_hexosaminidase superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49563	chr_23	mgc173657 protein (GH20_hexosaminidase superfamily)	52044	55384	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0342

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0245	0.30	97 620000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GH20_hexosaminidase superfamily		Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,...	-	407.369	2.86E-133	616 - 936	superfamily	261523
Glycohydro_20b2		beta-acetyl hexosaminidase like; beta-acetyl hexosaminidase like.	cl03741	71.9886	1.10E-14	453 - 585	specific	258982
Glyco_hydro_20b superfamily		Glycosyl hydrolase family 20, domain 2; This domain has a zincin-like fold.	-	71.9886	1.10E-14	453 - 585	superfamily	261858

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	138760	132369	237396	Cre11.g467779.t1.1	AT1G65590.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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