PHATRDRAFT_49726 abc transporter family protein (3a01204)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_49726 chr_24 abc transporter family protein (3a01204) 72454 75009 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0129

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0077
 0.23

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 221.271 4.37E-67 139 - 370 superfamily 266551
ABC2_membrane ABC-2 type transporter; ABC-2 type transporter. cl17235 125.063 2.27E-32 458 - 668 specific 250332
ABC2_membrane superfamily ABC-2 type transporter; ABC-2 type transporter. - 125.063 2.27E-32 458 - 668 superfamily 266576
3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein; [Transport and binding proteins, Other]. - 373.227 7.04E-119 158 - 725 multi-dom 233207

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
261690 Not available 202419 320462 Not available Cre12.g547300.t1.1 AT2G01320.3 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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