PHATRDRAFT_49771 (PI-PLC-X)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_49771 chr_24 (PI-PLC-X) 245769 250303 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0196

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0147
 0.26

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
C2_PLC_like C2 domain present in Phosphoinositide-specific phospholipases C (PLC); PLCs are involved in the... cl14603 106.472 3.90E-26 1320 - 1444 specific 175974
C2 superfamily C2 domain; The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-... - 106.472 3.90E-26 1320 - 1444 superfamily 265430
PI-PLC-X Phosphatidylinositol-specific phospholipase C, X domain; This associates with pfam00387 to form a... cl17177 141.493 3.91E-38 395 - 560 specific 249822
PI-PLC-X superfamily Phosphatidylinositol-specific phospholipase C, X domain; This associates with pfam00387 to form a... - 141.493 3.91E-38 395 - 560 superfamily 266531
PI-PLC-Y superfamily Phosphatidylinositol-specific phospholipase C, Y domain; This associates with pfam00388 to form a... - 89.6055 1.88E-20 1222 - 1307 superfamily 265449
EF-hand_like superfamily Phosphoinositide-specific phospholipase C, efhand-like; Members of this family are predominantly... - 38.3234 0.0019786 308 - 385 superfamily 263714

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 238106 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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