PHATRDRAFT_49782 guanine cytosine deaminase (CumB)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49782	chr_24	guanine cytosine deaminase (CumB)	278523	279206	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0046

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0073	0.29	0.0000007 9600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CumB		Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal...	cl00269	64.2555	2.38E-13	34 - 159	specific	223663
cytidine_deaminase-like superfamily		Cytidine and deoxycytidylate deaminase zinc-binding region. The family contains cytidine deaminases...	-	64.2555	2.38E-13	34 - 159	superfamily	260314

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	230724	68872	468705	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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