PHATRDRAFT_49878 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49878	chr_25		171395	172996	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0249

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0183	0.27	2.9 4.4

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
EFh		EF-hand, calcium binding motif; EF-hands are calcium-binding motifs that occur at least in pairs....	cl17302	38.8989	0.000279598	35 - 61	specific	197492
EF-hand_8 superfamily		EF-hand domain pair; EF-hand domain pair.	-	38.8989	0.000279598	35 - 61	superfamily	266615
DUF1180 superfamily		Protein of unknown function (DUF1180); This family consists of several hypothetical mammalian...	-	36.0533	0.00908408	142 - 240	superfamily	191582

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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