PHATRDRAFT_49919 splicing endonuclease positive effector sen1 (AAA_12 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_49919 chr_25 splicing endonuclease positive effector sen1 (AAA_12 superfamily) 290719 294011 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0127

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0063
 0.36

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA_12 superfamily AAA domain; This family of domains contain a P-loop motif that is characteristic of the AAA... - 104.167 7.51E-25 863 - 1014 superfamily 257490
COG1112 Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and... - 100.036 9.48E-22 533 - 1013 multi-dom 224037

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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