PHATRDRAFT_50174 rhodanese domain protein (PRK00142)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_50174 chr_27 rhodanese domain protein (PRK00142) 269104 271824 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0396

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0171
 0.38

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AdoMet_MTases superfamily S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases... - 118.581 1.08E-29 610 - 906 superfamily 266528
RHOD superfamily Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese... - 98.8058 3.61E-24 393 - 504 superfamily 260205
PHD PHD-finger; PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner... cl17445 35.9336 0.0056995 555 - 578 specific 250011
PHD superfamily PHD-finger; PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner... - 35.9336 0.0056995 555 - 578 superfamily 266687
PRK00142 putative rhodanese-related sulfurtransferase; Provisional - 231.66 1.41E-68 262 - 583 multi-dom 234663

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
36609 Not available 159704 319960 240751 Cre06.g304600.t1.2 Not available 308815

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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