PHATRDRAFT_50177 (Glyco_hydrolase_16 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_50177	chr_27	(Glyco_hydrolase_16 superfamily)	280766	283163	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0122

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0119	0.39	57000 330000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Glyco_hydrolase_16 superfamily		glycosyl hydrolase family 16; The O-Glycosyl hydrolases are a widespread group of enzymes that...	-	286.899	5.36E-90	202 - 595	superfamily	260271
EGF_2 superfamily		EGF-like domain; This family contains EGF domains found in a variety of extracellular proteins.	-	35.1124	0.00847974	654 - 680	superfamily	254557
EGF_2 superfamily		EGF-like domain; This family contains EGF domains found in a variety of extracellular proteins.	-	35.1124	0.00847974	654 - 680	superfamily	254557

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
262361		Not available	149475	250373	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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