PHATRDRAFT_50303 atg8_phyinautophagy-related protein 8 precursor (autophagy-related ubiquitin-like modifier atg8) (GABARAP)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_50303	chr_28	atg8_phyinautophagy-related protein 8 precursor (autophagy-related ubiquitin-like modifier atg8) (...	239290	239980	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0338

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0081	0.30	0.00000017 120000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GABARAP		Ubiquitin domain of GABA-receptor-associated protein; GABARAP (GABA-receptor-associated protein)...	cl00155	199.769	7.08E-67	5 - 116	specific	176355
UBQ superfamily		Ubiquitin-like proteins; Ubiquitin homologs; Includes ubiquitin and ubiquitin-like proteins....	-	199.769	7.08E-67	5 - 116	superfamily	260222

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
32176		Not available	267723	195579	439957	Cre16.g689650.t1.2	AT2G05630.1	353495

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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