PHATRDRAFT_50457 mechanosensitive ion channel domain-containing (MscS)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_50457	chr_30	mechanosensitive ion channel domain-containing (MscS)	123145	126883	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0357

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0039	0.39	64000000 0.0000099

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MS_channel superfamily		Mechanosensitive ion channel; Two members of this protein family from M. jannaschii have been...	-	72.6142	2.79E-14	795 - 936	superfamily	250229
MscS		Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	-	74.1866	1.82E-14	764 - 965	multi-dom	223740

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	136035	Not available	358244	Cre12.g505800.t1.1	AT5G12080.3	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments