PHATRDRAFT_50520 regulator of chromosome condensation (RCC1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_50520 chr_30 regulator of chromosome condensation (RCC1) 298531 300619 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0147

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0133
 0.27

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 36.3508 0.00286962 329 - 377 superfamily 249843
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 36.3508 0.00286962 329 - 377 superfamily 249843
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 36.3508 0.00286962 329 - 377 superfamily 249843
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 36.3508 0.00286962 329 - 377 superfamily 249843
RCC1_2 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 43.2453 1.09E-05 364 - 393 superfamily 257859
RCC1_2 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 43.2453 1.09E-05 364 - 393 superfamily 257859
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 36.3508 0.00286962 329 - 377 superfamily 249843
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 36.3508 0.00286962 329 - 377 superfamily 249843
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 36.3508 0.00286962 329 - 377 superfamily 249843
RCC1 superfamily Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1)... - 36.3508 0.00286962 329 - 377 superfamily 249843

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
264699 Not available 185872 250137 198992 Cre17.g742200.t1.1 AT1G19880.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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