PHATRDRAFT_50804 l-lactate dehydrogenase (FMN_dh)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_50804	chr_4	l-lactate dehydrogenase (FMN_dh)	864829	866244	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0480

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0235	0.24	1000 1900

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
alpha_hydroxyacid_oxid_FMN		Family of homologous FMN-dependent alpha-hydroxyacid oxidizing enzymes. This family occurs in both...	cl17186	365.617	2.21E-124	38 - 400	specific	239203
TIM_phosphate_binding superfamily		TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an...	-	365.617	2.21E-124	38 - 400	superfamily	266538
FMN_dh		FMN-dependent dehydrogenase; FMN-dependent dehydrogenase.	-	415.783	2.88E-143	50 - 408	multi-dom	250340

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3353		Not available	274468	203927	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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