PHATRDRAFT_51157 actin a (ACTIN)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_51157 chr_19 actin a (ACTIN) 119963 121096 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0132

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0153
 0.26

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NBD_sugar-kinase_HSP70_actin Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily; This superfamily includes... cl17037 74.1623 9.19E-16 10 - 183 specific 212657
NBD_sugar-kinase_HSP70_actin superfamily Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily; This superfamily includes... - 38.5639 0.00180422 273 - 336 superfamily 266502
NBD_sugar-kinase_HSP70_actin superfamily Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily; This superfamily includes... - 38.5639 0.00180422 273 - 336 superfamily 266502
ACTIN Actin; ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily - 629.674 0 8 - 377 multi-dom 214592

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
25772 Not available 222567 216762 447172 Not available Not available 354739

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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