PHATRDRAFT_51727 gtp binding protein (Rab1_Ypt1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_51727 chr_5 gtp binding protein (Rab1_Ypt1) 215777 216500 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0110

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Rab1_Ypt1 Rab GTPase family 1 includes the yeast homolog Ypt1; Rab1/Ypt1 subfamily. Rab1 is found in every... cl17170 309.644 7.18E-108 14 - 177 specific 206661
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 309.644 7.18E-108 14 - 177 superfamily 266525
COG1100 GTPase SAR1 and related small G proteins [General function prediction only] - 148.185 5.80E-44 12 - 208 multi-dom 224025

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
843 Not available 215736 317756 Not available Not available Not available 354794

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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