PHATRDRAFT_51931 plasmodium falciparum polyubiquitin (Ubiquitin)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_51931 chr_8 plasmodium falciparum polyubiquitin (Ubiquitin) 231726 232869 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0304

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0055
 0.36

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ubiquitin Ubiquitin; Ubiquitin (includes Ubq/RPL40e and Ubq/RPS27a fusions as well as homopolymeric... cl00155 150.791 8.33E-45 305 - 380 specific 176398
UBQ superfamily Ubiquitin-like proteins; Ubiquitin homologs; Includes ubiquitin and ubiquitin-like proteins.... - 150.791 8.33E-45 305 - 380 superfamily 260222
Ubiquitin Ubiquitin; Ubiquitin (includes Ubq/RPL40e and Ubq/RPS27a fusions as well as homopolymeric... cl00155 150.791 8.33E-45 305 - 380 specific 176398
UBQ superfamily Ubiquitin-like proteins; Ubiquitin homologs; Includes ubiquitin and ubiquitin-like proteins.... - 150.791 8.33E-45 305 - 380 superfamily 260222
Ubiquitin Ubiquitin; Ubiquitin (includes Ubq/RPL40e and Ubq/RPS27a fusions as well as homopolymeric... cl00155 150.791 8.33E-45 305 - 380 specific 176398
UBQ superfamily Ubiquitin-like proteins; Ubiquitin homologs; Includes ubiquitin and ubiquitin-like proteins.... - 150.791 8.33E-45 305 - 380 superfamily 260222
Ubiquitin Ubiquitin; Ubiquitin (includes Ubq/RPL40e and Ubq/RPS27a fusions as well as homopolymeric... cl00155 150.791 8.33E-45 305 - 380 specific 176398
UBQ superfamily Ubiquitin-like proteins; Ubiquitin homologs; Includes ubiquitin and ubiquitin-like proteins.... - 150.791 8.33E-45 305 - 380 superfamily 260222
Ubiquitin Ubiquitin; Ubiquitin (includes Ubq/RPL40e and Ubq/RPS27a fusions as well as homopolymeric... cl00155 150.791 8.33E-45 305 - 380 specific 176398
UBQ superfamily Ubiquitin-like proteins; Ubiquitin homologs; Includes ubiquitin and ubiquitin-like proteins.... - 150.791 8.33E-45 305 - 380 superfamily 260222

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 268616 63131 349903 Cre11.g467567.t1.1 AT5G03240.3 353926

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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