PHATRDRAFT_522 eukaryotic translation initiation factor 3 subunit 8 (eIF-3c_N superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_522	chr_18	eukaryotic translation initiation factor 3 subunit 8 (eIF-3c_N superfamily)	358657	361619	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0153

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0098	0.29	990 110

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
eIF-3c_N superfamily		Eukaryotic translation initiation factor 3 subunit 8 N-terminus; The largest of the mammalian...	-	434.997	5.01E-143	1 - 556	superfamily	253208
PAM		PCI/PINT associated module; PCI/PINT associated module.	cl02111	64.1855	2.17E-12	639 - 723	specific	214803
PCI superfamily		PCI domain; This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15).	-	64.1855	2.17E-12	639 - 723	superfamily	261183

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
28441		Not available	167654	248380	249939	Cre04.g217550.t1.1	AT3G56150.2	561619

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments