PHATRDRAFT_53980 (gelsolin_S1_like)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_53980 chr_1 (gelsolin_S1_like) 1101597 1103003 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0366

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0193
 0.36

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
gelsolin_S1_like Gelsolin sub-domain 1-like domain found in gelsolin, severin, villin, and related proteins;... cl15697 169.326 2.95E-51 36 - 150 specific 200446
ADF_gelsolin superfamily Actin depolymerization factor/cofilin- and gelsolin-like domains; Actin depolymerization factor/... - 61.1112 7.83E-12 286 - 390 superfamily 265764
GEL Gelsolin homology domain; Gelsolin/severin/villin homology domain. Calcium-binding and actin-... cl15697 73.4809 2.73E-16 166 - 259 specific 214590
ADF_gelsolin superfamily Actin depolymerization factor/cofilin- and gelsolin-like domains; Actin depolymerization factor/... - 61.1112 7.83E-12 286 - 390 superfamily 265764
ADF_gelsolin superfamily Actin depolymerization factor/cofilin- and gelsolin-like domains; Actin depolymerization factor/... - 61.1112 7.83E-12 286 - 390 superfamily 265764

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 74969 Not available AT2G41740.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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