PHATRDRAFT_54119 (AMN1 superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_54119	chr_2	(AMN1 superfamily)	991455	993290	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0409

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0157	0.27	1800 860

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AMN1 superfamily		Antagonist of mitotic exit network protein 1; Amn1 has been functionally characterized in...	-	60.804	8.15E-11	391 - 581	superfamily	187754
LRR_RI superfamily		Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue...	-	40.0314	0.00107882	254 - 482	superfamily	238064

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
1588		Not available	272658	287249	Not available	Cre12.g559050.t1.2	AT2G06040.1	493652

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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