PHATRDRAFT_54150 heat shock protein hsp20 (ACD_sHsps_p23-like)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_54150	chr_3	heat shock protein hsp20 (ACD_sHsps_p23-like)	30400	31837	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0294

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0017	0.46	260000 300000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ACD_sHsps_p23-like		This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat...	cl00175	63.7623	6.05E-13	120 - 193	specific	107219
alpha-crystallin-Hsps_p23-like superfamily		alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a...	-	57.564	1.06E-10	214 - 287	superfamily	260235
ACD_sHsps-like		Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps...	cl00175	57.564	1.06E-10	214 - 287	specific	107221
alpha-crystallin-Hsps_p23-like superfamily		alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a...	-	57.564	1.06E-10	214 - 287	superfamily	260235
IbpA		Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover,...	-	53.1494	6.34E-09	120 - 194	multi-dom	223149

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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