PHATRDRAFT_54285 p-atpase family transporter: cation (P-ATPase-V)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_54285	chr_4	p-atpase family transporter: cation (P-ATPase-V)	1190420	1194443	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0114

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0097	0.27	190 29000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
E1-E2_ATPase superfamily		E1-E2 ATPase; E1-E2 ATPase.	-	86.4687	1.17E-18	100 - 365	superfamily	249606
COG4087 superfamily		Soluble P-type ATPase [General function prediction only]	-	45.6276	9.71E-06	674 - 735	superfamily	226572
COG4087 superfamily		Soluble P-type ATPase [General function prediction only]	-	45.6276	9.71E-06	674 - 735	superfamily	226572
P-ATPase-V		P-type ATPase of unknown pump specificity (type V); These P-type ATPases form a distinct clade but...	-	679.857	0	3 - 1031	multi-dom	233513

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	206011	Not available	462143	Not available	Not available	311397

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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