PHATRDRAFT_54477 atp citrate lyase isoform 2 isoform 13 (PLN02522)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_54477 chr_8 atp citrate lyase isoform 2 isoform 13 (PLN02522) 383601 386849 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0322

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0001
 0.41

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CCL_ACL-C Citryl-CoA lyase (CCL), the C-terminal portion of the single-subunit type ATP-citrate lyase (ACL)... cl00416 267.511 3.49E-82 842 - 1079 specific 99854
CS_ACL-C_CCL superfamily Citrate synthase (CS), citryl-CoA lyase (CCL), the C-terminal portion of the single-subunit type... - 267.511 3.49E-82 842 - 1079 superfamily 260413
Ligase_CoA superfamily CoA-ligase; This family includes the CoA ligases Succinyl-CoA synthetase alpha and beta chains,... - 87.6965 7.37E-20 646 - 770 superfamily 249950
CoA_binding superfamily CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins including... - 52.1835 4.76E-08 482 - 586 superfamily 266646
ATP-grasp_2 superfamily ATP-grasp domain; ATP-grasp domain. - 50.3163 4.97E-07 8 - 210 superfamily 254804
PLN02522 ATP citrate (pro-S)-lyase - 1139.93 0 478 - 1081 multi-dom 178137
PLN02235 ATP citrate (pro-S)-lyase - 403.38 1.46E-129 1 - 419 multi-dom 177879

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 212647 193895 Not available Cre02.g088600.t1.2 AT5G49460.1 549026

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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