PHATRDRAFT_545 thermostable beta-glucosidase (glycoside hydrolase family 3) (Glyco_hydro_3)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_545 chr_24 thermostable beta-glucosidase (glycoside hydrolase family 3) (Glyco_hydro_3) 320606 322573 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0156

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0100
 0.43

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Glyco_hydro_3 Glycosyl hydrolase family 3 N terminal domain; Glycosyl hydrolase family 3 N terminal domain. cl07971 299.605 7.23E-96 21 - 276 specific 250238
Glyco_hydro_3 superfamily Glycosyl hydrolase family 3 N terminal domain; Glycosyl hydrolase family 3 N terminal domain. - 299.605 7.23E-96 21 - 276 superfamily 263517
Glyco_hydro_3_C Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be... cl08459 173.277 1.14E-49 308 - 545 specific 250964
Glyco_hydro_3_C superfamily Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be... - 173.277 1.14E-49 308 - 545 superfamily 263668
Fn3-like superfamily Fibronectin type III-like domain; This domain has a fibronectin type III-like structure. It is... - 92.4631 1.30E-22 581 - 651 superfamily 258486
Fn3-like superfamily Fibronectin type III-like domain; This domain has a fibronectin type III-like structure. It is... - 92.4631 1.30E-22 581 - 651 superfamily 258486

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 181839 69449 457303 Not available Not available 351491

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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