PHATRDRAFT_54612 dna repair protein (ERCC4)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_54612 chr_10 dna repair protein (ERCC4) 915203 917413 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0131

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0122
 0.44

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ERCC4 ERCC4 domain; This domain is a family of nucleases. The family includes EME1 which is an essential... cl10594 78.9888 4.13E-17 160 - 297 specific 251501
ERCC4 superfamily ERCC4 domain; This domain is a family of nucleases. The family includes EME1 which is an essential... - 78.9888 4.13E-17 160 - 297 superfamily 264010
Rel-Spo_like superfamily RelA- and SpoT-like ppGpp Synthetases and Hydrolases, catalytic domain; The Rel-Spo superfamily... - 38.3302 0.00411095 35 - 86 superfamily 264491

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 241086 Not available Not available Not available AT4G30870.1 520176

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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