PHATRDRAFT_54738 triosephosphate isomerase (TIM)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_54738	chr_13	triosephosphate isomerase (TIM)	595710	596516	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0280

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0034	0.35	0.0082 2500

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TIM		Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of...	cl17186	335.66	6.43E-116	19 - 260	specific	238190
TIM_phosphate_binding superfamily		TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an...	-	335.66	6.43E-116	19 - 260	superfamily	266538

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
30380		Not available	274452	247019	Not available	Not available	Not available	285741

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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