PHATRDRAFT_54872 (Peptidase_C14)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_54872	chr_16	(Peptidase_C14)	534113	535466	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0106

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0015	0.37	210 87000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Peptidase_C14		Caspase domain; Caspase domain.	cl00042	108.185	8.55E-28	116 - 280	specific	250035
CASc superfamily		Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-...	-	40.7753	0.000191212	13 - 100	superfamily	260151
CASc superfamily		Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-...	-	40.7753	0.000191212	13 - 100	superfamily	260151

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
270038		Not available	150489	Not available	43172	Cre03.g184700.t1.2	AT1G02170.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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