PHATRDRAFT_54940 membrane protein (Cyt_b561_FRRS1_like)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_54940 chr_18 membrane protein (Cyt_b561_FRRS1_like) 506372 507844 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0257

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0006
 0.56

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561), including the FRRS1 gene product; Cytochrome b(561), as found in... cl14616 130.157 1.93E-35 217 - 417 specific 176490
Cyt_b561 superfamily Eukaryotic cytochrome b(561); Cytochrome b(561) is a family of endosomal or secretory vesicle-... - 130.157 1.93E-35 217 - 417 superfamily 265434
DOMON_DOH DOMON-like domain of copper-dependent monooxygenases and related proteins; This diverse family... cl14783 79.4687 7.70E-18 62 - 177 specific 187689
DOMON_like superfamily Domon-like ligand-binding domains; DOMON-like domains can be found in all three kindgoms of life... - 79.4687 7.70E-18 62 - 177 superfamily 265451

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 167135 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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