PHATRDRAFT_54954 calmodulin-domain protein kinase cdpk isoform 9 (EFh)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_54954	chr_19	calmodulin-domain protein kinase cdpk isoform 9 (EFh)	348151	349811	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0445

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0092	0.51	1500 4400

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
EFh superfamily		EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal...	-	54.4761	1.56E-09	382 - 440	superfamily	238008
EFh superfamily		EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal...	-	54.4761	1.56E-09	382 - 440	superfamily	238008
EF-hand_7		EF-hand domain pair; EF-hand domain pair.	-	43.9117	6.65E-06	383 - 439	multi-dom	257819

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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