PHATRDRAFT_55150 pbx knotted 1 homeobox 1 (homeodomain)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_55150	chr_27	pbx knotted 1 homeobox 1 (homeodomain)	130783	132098	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0401

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0011	0.40	5100 110000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
homeodomain		Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic...	cl00084	49.1641	6.03E-08	42 - 105	specific	238039
homeodomain superfamily		Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic...	-	49.1641	6.03E-08	42 - 105	superfamily	260181

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
269690		Not available	165474	161633	Not available	Not available	AT5G25220.1	484958

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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