PHATRDRAFT_5546 rexo4_klula rna exonuclease 4 (REX4_like)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_5546	chr_4	rexo4_klula rna exonuclease 4 (REX4_like)	404035	404550	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0253

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0018	0.38	0.000056 9.6

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
REX4_like		DEDDh 3'-5' exonuclease domain of RNA exonuclease 4, XPMC2, Interferon Stimulated...	cl10012	202.361	1.42E-66	7 - 164	specific	99847
DnaQ_like_exo superfamily		DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily; The DnaQ-like...	-	202.361	1.42E-66	7 - 164	superfamily	263941

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	194226	62602	Not available	Cre11.g480060.t1.2	Not available	489818

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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