PHATRDRAFT_5780 3-ketoacyl-(acyl-carrier-protein) reductase (SDR_c)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_5780	chr_24	3-ketoacyl-(acyl-carrier-protein) reductase (SDR_c)	392693	393274	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0188

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0224	0.21	0.31 29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SDR_c		classical (c) SDRs; SDRs are a functionally diverse family of oxidoreductases that have a single...	cl09931	190.187	2.38E-60	12 - 194	specific	212491
NADB_Rossmann superfamily		Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD...	-	190.187	2.38E-60	12 - 194	superfamily	263925
adh_short		short chain dehydrogenase; This family contains a wide variety of dehydrogenases.	-	106.482	7.37E-29	12 - 177	multi-dom	249592

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	143055	137912	Not available	Not available	AT5G65205.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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