PHATRDRAFT_6847 40s ribosomal proteinexpressed (PTZ00155)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_6847 chr_7 40s ribosomal proteinexpressed (PTZ00155) 29006 29506 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0151

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0126
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
S4 S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged... cl09940 43.007 9.62E-07 99 - 142 specific 238095
S4 superfamily S4/Hsp/ tRNA synthetase RNA-binding domain; The domain surface is populated by conserved, charged... - 43.007 9.62E-07 99 - 142 superfamily 263930
Ribosomal_S4 superfamily Ribosomal protein S4/S9 N-terminal domain; This family includes small ribosomal subunit S9 from... - 75.8314 2.57E-18 1 - 98 superfamily 249643
PTZ00155 40S ribosomal protein S9; Provisional - 282.738 1.04E-97 1 - 167 multi-dom 185484

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
268651 Not available 217171 262519 61745 Cre08.g359750.t2.1 AT5G39850.1 354997

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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