PHATRDRAFT_6914 peptide deformylase (Pep_deformylase)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_6914	chr_28	peptide deformylase (Pep_deformylase)	281705	282184	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0352

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0202	0.37	0.0005 6000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Pep_deformylase		Polypeptide deformylase; Polypeptide deformylase.	cl00234	110.348	6.90E-31	2 - 160	specific	250535
Pep_deformylase superfamily		Polypeptide or peptide deformylase; a family of metalloenzymes that catalyzes the removal of the N-...	-	110.348	6.90E-31	2 - 160	superfamily	260286

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
10063		Not available	153912	198026	195025	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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