PHATRDRAFT_8132 rrm-containing protein (RRM_SF3B14)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_8132 chr_11 rrm-containing protein (RRM_SF3B14) 330829 331134 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0282

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RRM_SF3B14 RNA recognition motif found in pre-mRNA branch site protein p14 (SF3B14) and similar proteins; This... cl17169 146.222 1.44E-46 6 - 83 specific 240687
RRM_SF superfamily RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... - 146.222 1.44E-46 6 - 83 superfamily 266524
COG0724 RNA-binding proteins (RRM domain) [General function prediction only] - 66.8942 1.33E-14 3 - 89 multi-dom 223796

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
20086 Not available 215433 152941 63012 Cre03.g158950.t1.1 AT5G12190.1 312714

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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