PHATRDRAFT_9180 atp-bindingsub-family c (cftr mrp)member 4 (CFTR_protein)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_9180 chr_1 atp-bindingsub-family c (cftr mrp)member 4 (CFTR_protein) 332921 336829 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0480

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0251
 0.21

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABCC_MRP_domain2 ATP-binding cassette domain 2 of multidrug resistance-associated protein; The ABC subfamily C is... cl17201 352.566 2.16E-112 992 - 1213 specific 213211
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 233.901 4.94E-70 386 - 583 superfamily 266551
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 233.901 4.94E-70 386 - 583 superfamily 266551
ABC_membrane superfamily ABC transporter transmembrane region; This family represents a unit of six transmembrane helices.... - 80.0296 1.98E-16 78 - 343 superfamily 250039
ABC_membrane superfamily ABC transporter transmembrane region; This family represents a unit of six transmembrane helices.... - 80.0296 1.98E-16 78 - 343 superfamily 250039
CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR); The model describes the cystis fibrosis... - 556.061 2.01E-173 1 - 1228 multi-dom 233335

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 262102 Not available 50800 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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