PHATRDRAFT_974 ubiquitin-specific protease (Peptidase_C19 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_974	chr_1	ubiquitin-specific protease (Peptidase_C19 superfamily)	542625	545069	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0411

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0062	0.39	3200 310000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Peptidase_C19 superfamily		Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove...	-	104.665	6.58E-25	1 - 207	superfamily	261337
Peptidase_C19 superfamily		Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove...	-	104.665	6.58E-25	1 - 207	superfamily	261337

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	159569	261725	Not available	Not available	AT4G10570.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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