10142 Got1 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10142 chr_15 Got1 superfamily 383894 384641 - Got1 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451890 Thaps10142.2, Thaps10142.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0367

Most Highly Correlated Transcripts

36372

S_TKc
0.8852

8562

hypothetical protein
0.8833

13448

Sec1
0.8766

8527

hypothetical protein
0.8749

262215

YEATS
0.8703

6316

hypothetical protein
0.8699

6236

COG4976
0.869

24475

(RPT3) PTZ00454
0.8686

950

hypothetical protein
0.8684

263879

AAA
0.8684

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Got1 superfamily Got1/Sft2-like family; Traffic through the yeast Golgi complex depends on a member of the syntaxin... - 75.7239 4.53E-17 37 - 211 superfamily 261191

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42484 PHATRDRAFT_42484 176571 256532 Not available Cre17.g709250.t1.1 AT5G56020.1 354747

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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