10219 Chloroa_b-bind
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10219 chr_15 Chloroa_b-bind 639843 642513 + Chloroa_b-bind

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0096

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0018
 0.42

Most Highly Correlated Transcripts

10750

MDR8
0.8743

6580

hypothetical protein
0.8592

270222

0.8327

6536

hypothetical protein
0.8324

3882

hypothetical protein
0.8301

11420

hypothetical protein
0.829

35279

(H4_2) H4
0.828

bd1935

(bd1935) NA
0.8248

3243

hypothetical protein
0.8174

262313

Chloroa_b-bind superfamily
0.8167

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Chloroa_b-bind Chlorophyll A-B binding protein; Chlorophyll A-B binding protein. cl02879 112.4 7.75E-29 67 - 215 specific 249913
Chloroa_b-bind superfamily Chlorophyll A-B binding protein; Chlorophyll A-B binding protein. - 112.4 7.75E-29 67 - 215 superfamily 261492
AdoMet_MTases superfamily S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases... - 111.946 5.61E-28 469 - 678 superfamily 266528

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre10.g455190.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0009765 GO:0016020 -

GO:0009765

photosynthesis, light harvesting

Details: 
Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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