10545 Rhomboid superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10545 chr_17 Rhomboid superfamily 23705 26505 + Rhomboid superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7453106 Thaps10545.3, Thaps10545.4, Thaps10545.2, Thaps10545.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0500

Most Highly Correlated Transcripts

bd1098

(bd1098) NA
0.8453

bd813

(bd813) NA
0.7857

bd788

(bd788) NA
0.7828

bd1813

(bd1813) NA
0.7451

bd633

(bd633) NA
0.7448

bd692

(bd692) NA
0.7422

bd759

(bd759) NA
0.6901

bd1772

(bd1772) NA
0.6822

bd824

(bd824) NA
0.6753

261696

0.6499

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Rhomboid superfamily Rhomboid family; This family contains integral membrane proteins that are related to Drosophila... - 66.863 7.48E-13 273 - 458 superfamily 264372

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48717 PHATRDRAFT_48717 246963 45246 Not available Not available AT3G59520.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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