10761 (Tp_HSF_2a) HSF_DNA-bind superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10761 chr_18 (Tp_HSF_2a) HSF_DNA-bind superfamily 14671 17294 - HSF_DNA-bind superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0468

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0023
 0.43

Most Highly Correlated Transcripts

bd812

(bd812) NA
0.89

bd811

(bd811) NA
0.8462

bd816

(bd816) NA
0.7664

bd696

(bd696) AAT_I superfamily
0.7576

bd799

(bd799) ZnMc_pappalysin_like
0.7564

bd1770

(bd1770) NA
0.7552

bd396

(bd396) NA
0.7523

bd648

(bd648) NA
0.6908

bd836

(bd836) Methyltransf_16 superfamily
0.6719

bd1948

(bd1948) NA
0.6688

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HSF_DNA-bind superfamily HSF-type DNA-binding; HSF-type DNA-binding. - 72.9178 2.11E-15 187 - 274 superfamily 264552

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003700 GO:0005634 GO:0006355 GO:0003677 GO:0004308 -

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0004308

exo-alpha-sialidase activity

Details: 
Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.
GO Category: 
MF

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