10858 PTZ00121Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
10858	chr_18	PTZ00121	311484	312459	-	PTZ00121

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442963	Thaps10858.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0233

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0291	0.48	30000 2800

Most Highly Correlated Transcripts

261038 0.7661	263864 0.7618	669 Ras_like_GTPase superfamily 0.7067	270309 hypothetical protein 0.6897	6170 hypothetical protein 0.6479	9345 hypothetical protein 0.6429
2886 hypothetical protein 0.6417	bd1850 (bd1850) NA 0.6348	bd722 (bd722) NA 0.6326	263118 ABC_ATPase superfamily 0.625

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PTZ00121		MAEBL; Provisional	-	67.8587	8.81E-13	98 - 238	multi-dom	173412

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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