11111 DUF383 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11111 chr_19a_19 DUF383 superfamily 171854 179286 - DUF383 superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0318

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0210
 0.31

Most Highly Correlated Transcripts

3398

hypothetical protein
0.8735

36650

hypothetical protein
0.8735

32395

RNA_pol
0.8669

40529

COG2319
0.861

22448

hypothetical protein
0.8585

270148

NBD_sugar-kinase_HSP70_actin superfamily
0.8579

3315

hypothetical protein
0.8572

40871

COG1444
0.8557

21222

SrmB
0.8518

22482

hypothetical protein
0.8508

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF383 superfamily Domain of unknown function (DUF383); Domain of unknown function (DUF383). - 93.0813 9.61E-21 323 - 460 superfamily 252344

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48410 PHATRDRAFT_48410 229695 136556 Not available Not available Not available 349797

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006350 GO:0006952 GO:0003917 -

GO:0006350

NA

Details: 
NA
GO Category: 
NA

GO:0006952

defense response

Details: 
Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
GO Category: 
BP

GO:0003917

DNA topoisomerase type I activity

Details: 
Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle.
GO Category: 
MF

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