11117 EFh
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11117 chr_19a_19 EFh 186429 187128 + EFh

Synonyms

NCBI ID Ensembl Genomes exon ID
7446279 Thaps11117.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0305

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0265
 0.39

Most Highly Correlated Transcripts

bd1803

(bd1803) NA
0.9241

bd1891

(bd1891) COG3899
0.8612

bd739

(bd739) NA
0.8331

bd895

(bd895) NA
0.8283

bd1802

(bd1802) NA
0.8258

bd740

(bd740) NA
0.7971

bd1487

(bd1487) PLN02688
0.7874

bd1749

(bd1749) NA
0.7752

19553

PX_domain superfamily
0.7685

4599

hypothetical protein
0.7516

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 62.1801 2.55E-13 148 - 207 superfamily 238008
EFh superfamily EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal... - 62.1801 2.55E-13 148 - 207 superfamily 238008
EF-hand_7 EF-hand domain pair; EF-hand domain pair. - 55.0824 8.65E-11 154 - 207 multi-dom 257819

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_37918 PHATRDRAFT_37918 Not available Not available 349928 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005509 -

GO:0005509

calcium ion binding

Details: 
Interacting selectively and non-covalently with calcium ions (Ca2+).
GO Category: 
MF

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