11167 ZnMc superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
11167 chr_19a_19 ZnMc superfamily 334220 338299 - ZnMc superfamily
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0018
Normalized Mean Residue
Thaps_bicluster_0037
0.54
(bd1946) NA
0.8801
hypothetical protein
0.8566
(bd1801) NA
0.8379
(bd692) NA
0.8325
(bd738) NA
0.8317
hypothetical protein
0.8312
(bd1813) NA
0.8311
(bd1439) ycf35
0.8297
(bd1877) NA
0.8238
(bd759) NA
0.8189
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ZnMc superfamily Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches,... - 90.5296 3.31E-20 258 - 444 superfamily 260167
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0004222 GO:0006508 GO:0008237 GO:0008270 -

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

metallopeptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF
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