11253 DDE_Tnp_4
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11253 chr_19a_19 DDE_Tnp_4 587901 588741 - DDE_Tnp_4

Synonyms

NCBI ID Ensembl Genomes exon ID
7446245 Thaps11253.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0344

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0074
 0.37

Most Highly Correlated Transcripts

bd816

(bd816) NA
0.9024

bd153

(bd153) NA
0.8867

262676

0.8605

bd824

(bd824) NA
0.8127

3981

hypothetical protein
0.8046

bd630

(bd630) NA
0.8006

bd650

(bd650) NA
0.7888

bd648

(bd648) NA
0.7857

8233

hypothetical protein
0.7818

bd811

(bd811) NA
0.7785

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DDE_Tnp_4 DDE superfamily endonuclease; This family of proteins are related to pfam00665 and are probably... cl17710 142.001 1.41E-41 12 - 174 specific 257687
DDE_Tnp_4 superfamily DDE superfamily endonuclease; This family of proteins are related to pfam00665 and are probably... - 142.001 1.41E-41 12 - 174 superfamily 266781

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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